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AGB also connects to R providing extensibility for AGB through the he vast collection of packages available via R. AGB is programmed in Java Swing using the Spring framework for control of software interface components and the Hibernate framework for mapping data from two relational databases, AGB-Manager and AGB-Data. Programing design: T his system is fully integrated in the Eclipse programming environment and is platform-independent. There are plans to add a module for users to export datasets in formats for downstream analysis with other tools.ĪGB was designed based on a maize genetics and breeding program but should be compatible with other programs. AGB does not handle sequence or genotype data or perform data analysis. Projects and data are preserved as users advance through modules to choose germplasm, create experimental designs, organize and plant genetic/breeding stocks and produce row or plant tags, create data collection files and upload phenotype or weather data, track tissue samples, record mating types and pedigrees when harvesting, inventory seed stocks created, and more. A project manager module provides an active memory of the workflow for different projects and allows collaborators to share/transfer responsibility in executing breeding and trialing activities across seasons and locations. AGB supports the complete workflow for managing genetics and breeding projects (from selecting stocks for a given planting to inventorying seed stocks from a harvest).
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Overview: Accrete Genetics & Breeding (AGB) is an open source laboratory information management system with an accompanying multi-user interface for plant genetics & breeding programs.
![Plant breeding software](https://kumkoniak.com/48.jpg)